DSpace Repository

On the transferability of the SPC/L water model to biomolecular simulation

Show simple item record

dc.creator Glättli Alice
dc.creator Oostenbrink Chris
dc.creator Daura Xavier
dc.creator Geerke Daan P.
dc.creator Yu Haibo
dc.creator van Gunsteren Wilfred F.
dc.date 2004
dc.date.accessioned 2013-06-01T11:12:44Z
dc.date.available 2013-06-01T11:12:44Z
dc.date.issued 2013-06-01
dc.identifier http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-97332004000100015
dc.identifier http://www.doaj.org/doaj?func=openurl&genre=article&issn=01039733&date=2004&volume=34&issue=1&spage=116
dc.identifier.uri http://koha.mediu.edu.my:8181/jspui/handle/123456789/8453
dc.description We investigated the performance of the recently developed SPC/L model for liquid water, as a pure liquid, in binary mixtures with DMSO, and as a solvent model in a peptide folding simulation. Additionally, in order to test the compatibility with the GROMOS biomolecular force field, free energies of hydration of a set of representative compounds were computed. The results are compared to those for the well established SPC water model, which is generally used as a solvent model in conjunction with the GROMOS force field already for more than two decades. It turns out that as a pure liquid and in binary mixtures with DMSO the SPC/L model outperforms SPC, whereas as solvent in combination with the GROMOS force field both models perform equally well.
dc.publisher Sociedade Brasileira de Física
dc.source Brazilian Journal of Physics
dc.title On the transferability of the SPC/L water model to biomolecular simulation


Files in this item

Files Size Format View

There are no files associated with this item.

This item appears in the following Collection(s)

Show simple item record

Search DSpace


Advanced Search

Browse

My Account