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A chloroplast protein binds a viroid RNA in vivo and facilitates its hammerhead-mediated self-cleavage

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dc.creator Daròs, José-Antonio
dc.creator Flores, Ricardo
dc.date 2008-04-16T09:39:09Z
dc.date 2008-04-16T09:39:09Z
dc.date 2002
dc.date.accessioned 2017-01-31T01:02:26Z
dc.date.available 2017-01-31T01:02:26Z
dc.identifier EMBO Journal 21(4): 749–759 (2002)
dc.identifier 1460-2075
dc.identifier http://hdl.handle.net/10261/3614
dc.identifier 10.1093/emboj/21.4.749
dc.identifier.uri http://dspace.mediu.edu.my:8181/xmlui/handle/10261/3614
dc.description Final full-text version of the paper available at http://www.nature.com/emboj/index.html
dc.description Viroids, small single-stranded circular RNAs (246–401 nucleotides), do not have mRNA capacity and must recruit host proteins to assist in the steps of their biological cycle. The nature of these cellular factors is poorly understood due to a lack of reliable experimental approaches. Here, to screen for host proteins interacting with viroid RNAs in vivo, we UV-irradiated avocado leaves infected with avocado sunblotch viroid (ASBVd), the type member of chloroplast viroids containing hammerhead ribozymes. This resulted in the detection of several ASBVd–host protein adducts. Tandem mass spectrometry analysis of the most abundant cross-linked species identified the protein component as two closely related chloroplast RNA-binding proteins (PARBP33 and PARBP35) of a family whose members previously have been shown to be involved in stabilization, maturation and editing of chloroplast transcripts. PARBP33 behaves as an RNA chaperone that stimulates in vitro the hammerhead-mediated self-cleavage of the multimeric ASBVd transcripts that result from rolling circle replication, indicating that this reaction, despite its RNA-based mechanism, is facilitated by proteins. The structural and functional parallelism between PARBP33 and PARBP35, and some proteins involved in viral RNA replication, indicates that viroids and RNA viruses recruit similar host proteins for their replication.
dc.description R.F. was partially supported by grant PB98-0500 of the DGES de España. J.A.D. was the recipient of a postdoctoral contract from the Ministerio de Ciencia y Tecnología de España.
dc.description Peer reviewed
dc.format 350274 bytes
dc.format application/pdf
dc.language eng
dc.publisher Nature Publishing Group
dc.rights closedAccess
dc.subject Avocado sunblotch viroid
dc.subject Catalytic RNAs
dc.subject Hammerhead ribozymes
dc.subject RNA-binding proteins
dc.subject RNA chaperones
dc.title A chloroplast protein binds a viroid RNA in vivo and facilitates its hammerhead-mediated self-cleavage
dc.type Artículo


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