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Bacillus subtilis SbcC protein plays an important role in DNA inter-strand cross-link repair

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dc.creator Mascarenhas, Judita
dc.creator Sánchez, Humberto
dc.creator Tadesse, Serkalem
dc.creator Kidane, Dawit
dc.creator Krisnamurthy, Mahalakshmi
dc.creator Alonso, Juan Carlos
dc.creator Graumann, Peter L.
dc.date 2008-04-04T09:59:23Z
dc.date 2008-04-04T09:59:23Z
dc.date 2006-06-16
dc.date.accessioned 2017-01-31T01:01:35Z
dc.date.available 2017-01-31T01:01:35Z
dc.identifier BMC Mol Biol. 2006; 7: 20
dc.identifier 1471-2199
dc.identifier http://hdl.handle.net/10261/3448
dc.identifier 10.1186/1471-2199-7-20
dc.identifier.uri http://dspace.mediu.edu.my:8181/xmlui/handle/10261/3448
dc.description This article is available from: http://www.biomedcentral.com/1471-2199/7/20
dc.description [Background] Several distinct pathways for the repair of damaged DNA exist in all cells. DNA modifications are repaired by base excision or nucleotide excision repair, while DNA double strand breaks (DSBs) can be repaired through direct joining of broken ends (non homologous end joining, NHEJ) or through recombination with the non broken sister chromosome (homologous recombination, HR). Rad50 protein plays an important role in repair of DNA damage in eukaryotic cells, and forms a complex with the Mre11 nuclease. The prokaryotic ortholog of Rad50, SbcC, also forms a complex with a nuclease, SbcD, in Escherichia coli, and has been implicated in the removal of hairpin structures that can arise during DNA replication. Ku protein is a component of the NHEJ pathway in pro- and eukaryotic cells.
dc.description [Results] A deletion of the sbcC gene rendered Bacillus subtilis cells sensitive to DNA damage caused by Mitomycin C (MMC) or by gamma irradiation. The deletion of the sbcC gene in a recN mutant background increased the sensitivity of the single recN mutant strain. SbcC was also non-epistatic with AddAB (analog of Escherichia coli RecBCD), but epistatic with RecA. A deletion of the ykoV gene encoding the B. subtilis Ku protein in a sbcC mutant strain did not resulted in an increase in sensitivity towards MMC and gamma irradiation, but exacerbated the phenotype of a recN or a recA mutant strain. In exponentially growing cells, SbcC-GFP was present throughout the cells, or as a central focus in rare cases. Upon induction of DNA damage, SbcC formed 1, rarely 2, foci on the nucleoids. Different to RecN protein, which forms repair centers at any location on the nucleoids, SbcC foci mostly co-localized with the DNA polymerase complex. In contrast to this, AddA-GFP or AddB-GFP did not form detectable foci upon addition of MMC.
dc.description [Conclusion] Our experiments show that SbcC plays an important role in the repair of DNA inter-strand cross-links (induced by MMC), most likely through HR, and suggest that NHEJ via Ku serves as a backup DNA repair system. The cell biological experiments show that SbcC functions in close proximity to the replication machinery, suggesting that SbcC may act on stalled or collapsed replication forks. Our results show that different patterns of localization exist for DNA repair proteins, and that the B. subtilis SMC proteins RecN and SbcC play distinct roles in the repair of DNA damage.
dc.description This work was partially supported by grants BMC2003-00150 and BIO2001-4342-E from DGI-MEC to J.C.A and from the Deutsche Forschungsgemeinschaft (Emmy Noether Programm) to P.L.G.
dc.description Peer reviewed
dc.format 1565148 bytes
dc.format application/pdf
dc.language eng
dc.publisher BioMed Central
dc.relation Publisher’s version
dc.rights openAccess
dc.title Bacillus subtilis SbcC protein plays an important role in DNA inter-strand cross-link repair
dc.type Artículo


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